Not sure if this is allowed or not but is there a way to disable mouse navigation in menus? (pause screen, Y/N confirmation etc.) or maybe is there a method so that the cursor didn't ruin the menu navigation?

This is bit annoying when you want to quickly accept/take items and your mouse is pointing to the "No" option and it just stuck there until I move the mouse

Another time that is annoying is when I want to "Restart at Checkpoint" then use the mouse for Y/N confirmation. Instead of "Restart at Checkpoint", the cursor automatically selects "Back to Main Menu" then hits "Yes"

very good pc port

unfortunately you have to learn how to counter the game being bad
it wont even happen again once you get used to moving your camera up just to avoid that
plus thats very useful if you want to do the merchant menuing using the mouse tech