Would say it counts as long as the ingame timer pops up.
The CrusheR had an update on 11.01.2020 which in addition to adding 28 maps (which were added to the Individual Levels leaderboard) the ingame timer underwent a change making the timer start when the blue floor in the map disapears instead of when the player loads into a map. Due to this update all runs done will be 10+ seconds faster, and therefore I've manually changed the time on all 249 runs that were done before the update to take away 10 seconds from them.
P.S if you find any runs where I didn't update to the new time or updated to the wrong time please notify me of it
as noted in the latest tweet by llama train studio https://twitter.com/Llama_Train_S/status/1180544618200535040 you can now double click to skip through text a lot faster which does indeed mean that the current runs are quite outdated due to having to wait for a lot of dialogue
Also couldn't tell which category a run belongs too with just a screenshot of the endcard.
I'd suggest watching the wr run I guess
If you did something wrong with a previous submission and it is already verified (or is pending to be verified) you can click on the run then the 3 dots to the right under the video and you will have the option to edit the run incase you put something wrong (like the time or platform etc). A moderator will have to verify the run again though if it already had been verified. If you have done a new run and want to submit it then you should just submit a new run instead of editing an old one.
https://www.speedrun.com/fe2/run/z57j4vdm btw this run also uses it
The main blue moon shortcut was patched, so a few runs needs to be invalid now instead (this includes my 1:30 and 1:31 + anna's 1:31 and 1:32
IL stands for Individual Levels, a.k.a running a single stage instead of the whole game.