Edit April 16th: i WAS having issues with the auto splitter but now its been resolved thanks to users @Evandar and @Tadyman

Check the autosplitter settings through Livesplit and see if the checked boxes correspond to your amount of splits. The autosplitter does not recognize the part of the game you are in, it just knows when to split. You probably have more boxes checked than splits on your splitter

If the autosplitter screws up your timer, you can still play the run out to the end as the run can be timed afterwards by the moderators. The main use for a timer is that it shows you and the viewer how long you've played for and how well a run is going, it's just an optional thing that a good amount of people use. All of my runs that were done on switch for example had no timer on screen as it was just inconvenient so I didn't use it.

For the part about your autosplitter, as evan said, you probably have too many split textboxes checked. The autosplitter doesn't look at the name of splits or whether it is at the end or not but rather just when the code registers that you have done a specific task like entering a room transition so it's very likely that you have checked a few if not all of them which may be there because some people split in different spots. Most people do just one for each unique area (castle town, fields, checkerboard, forest, prison, card castle, king and end) but you can have as few or as many splits as you want as their only purpose is to tell you your pace at certain points of the run heck, you can split for every room if you want. The only exception is the start and end so the timing is accurate but if you really want to, you can have whatever starting or ending time you want but it would be really stupid to do that.

@Tadyman Alright got it, i'll edit the post if i get it fixed Edit: Yeah i got it fixed, thanks

No problem :)